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Ytterbium in PDB 2k62: uc(Nmr) Solution Structure of the Supramolecular Adduct Between A Liver Cytosolic Bile Acid Binding Protein and A Bile Acid-Based Gd(III)-Chelate

Ytterbium Binding Sites:

The binding sites of Ytterbium atom in the uc(Nmr) Solution Structure of the Supramolecular Adduct Between A Liver Cytosolic Bile Acid Binding Protein and A Bile Acid-Based Gd(III)-Chelate (pdb code 2k62). This binding sites where shown within 5.0 Angstroms radius around Ytterbium atom.
In total only one binding site of Ytterbium was determined in the uc(Nmr) Solution Structure of the Supramolecular Adduct Between A Liver Cytosolic Bile Acid Binding Protein and A Bile Acid-Based Gd(III)-Chelate, PDB code: 2k62:

Ytterbium binding site 1 out of 1 in 2k62

Go back to Ytterbium Binding Sites List in 2k62
Ytterbium binding site 1 out of 1 in the uc(Nmr) Solution Structure of the Supramolecular Adduct Between A Liver Cytosolic Bile Acid Binding Protein and A Bile Acid-Based Gd(III)-Chelate


Mono view


Stereo pair view

A full contact list of Ytterbium with other atoms in the Yb binding site number 1 of uc(Nmr) Solution Structure of the Supramolecular Adduct Between A Liver Cytosolic Bile Acid Binding Protein and A Bile Acid-Based Gd(III)-Chelate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Yb201

b:10.0
occ:1.00
O8 A:ITL202 2.1 10.0 1.0
O6 A:ITL202 2.1 10.0 1.0
O10 A:ITL202 2.2 10.0 1.0
O4 A:ITL202 2.2 10.0 1.0
O3 A:ITL202 2.3 10.0 1.0
N1 A:ITL202 2.7 10.0 1.0
N3 A:ITL202 2.8 10.0 1.0
N2 A:ITL202 2.9 10.0 1.0
C34 A:ITL202 3.0 10.0 1.0
C32 A:ITL202 3.2 10.0 1.0
C38 A:ITL202 3.2 10.0 1.0
C36 A:ITL202 3.2 10.0 1.0
C33 A:ITL202 3.2 10.0 1.0
C25 A:ITL202 3.3 10.0 1.0
C31 A:ITL202 3.4 10.0 1.0
C37 A:ITL202 3.4 10.0 1.0
C35 A:ITL202 3.5 10.0 1.0
C28 A:ITL202 3.6 10.0 1.0
C26 A:ITL202 3.6 10.0 1.0
C27 A:ITL202 3.6 10.0 1.0
C30 A:ITL202 3.7 10.0 1.0
C29 A:ITL202 3.8 10.0 1.0
O7 A:ITL202 4.2 10.0 1.0
O13 A:ITL202 4.3 10.0 1.0
O9 A:ITL202 4.3 10.0 1.0
O11 A:ITL202 4.3 10.0 1.0
O12 A:ITL202 4.5 10.0 1.0
HH22 A:ARG55 4.7 100.0 1.0
HH21 A:ARG55 4.8 100.0 1.0
C39 A:ITL202 4.9 10.0 1.0

Reference:

S.Tomaselli, S.Zanzoni, L.Ragona, E.Gianolio, S.Aime, M.Assfalg, H.Molinari. Solution Structure of the Supramolecular Adduct Between A Liver Cytosolic Bile Acid Binding Protein and A Bile Acid-Based Gadolinium(III)-Chelate, A Potential Hepatospecific Magnetic Resonance Imaging Contrast Agent. J.Med.Chem. V. 51 6782 2008.
ISSN: ISSN 0022-2623
PubMed: 18939814
DOI: 10.1021/JM800820B
Page generated: Wed Dec 16 02:41:30 2020

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