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Ytterbium in PDB 4wj9: Structure of Human Apo ALDH1A1

Enzymatic activity of Structure of Human Apo ALDH1A1

All present enzymatic activity of Structure of Human Apo ALDH1A1:
1.2.1.36;

Protein crystallography data

The structure of Structure of Human Apo ALDH1A1, PDB code: 4wj9 was solved by C.A.Morgan, T.D.Hurley, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 109.30 / 1.74
Space group P 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 109.297, 109.297, 83.236, 90.00, 90.00, 90.00
R / Rfree (%) 18.5 / 21.6

Other elements in 4wj9:

The structure of Structure of Human Apo ALDH1A1 also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Ytterbium Binding Sites:

The binding sites of Ytterbium atom in the Structure of Human Apo ALDH1A1 (pdb code 4wj9). This binding sites where shown within 5.0 Angstroms radius around Ytterbium atom.
In total only one binding site of Ytterbium was determined in the Structure of Human Apo ALDH1A1, PDB code: 4wj9:

Ytterbium binding site 1 out of 1 in 4wj9

Go back to Ytterbium Binding Sites List in 4wj9
Ytterbium binding site 1 out of 1 in the Structure of Human Apo ALDH1A1


Mono view


Stereo pair view

A full contact list of Ytterbium with other atoms in the Yb binding site number 1 of Structure of Human Apo ALDH1A1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Yb601

b:42.4
occ:1.00
O A:HOH944 1.8 10.7 1.0
O A:HOH936 2.0 14.6 1.0
O A:HOH752 2.2 35.9 1.0
O A:HOH785 2.2 38.9 1.0
O A:HOH945 2.2 42.2 1.0
O A:HOH946 2.3 26.1 1.0
O A:HOH776 2.7 28.3 1.0
OE2 A:GLU46 4.5 49.7 1.0
OE1 A:GLU46 4.6 51.4 1.0
O A:ASN377 4.9 56.7 1.0
CD A:GLU46 5.0 50.2 1.0

Reference:

C.A.Morgan, T.D.Hurley. Development of A High-Throughput in Vitro Assay to Identify Selective Inhibitors For Human ALDH1A1. Chem.Biol.Interact. 2014.
ISSN: ISSN 0009-2797
PubMed: 25450233
DOI: 10.1016/J.CBI.2014.10.028
Page generated: Wed Dec 16 02:42:00 2020

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