Chemical elements
  Ytterbium
    Isotopes
    Energy
    Application
    Ytterbia
    PDB 1c5k-3fuh
      1c5k
      1cnt
      1ggy
      1gw6
      1h19
      1hs6
      1k90
      1lvc
      1ncg
      1nch
      1pk0
      1s26
      1sk6
      1sqm
      1ytt
      1z1y
      2bop
      2j6j
      2k62
      2o6n
      2r59
      2vj8
      3b7r
      3b7s
      3b7t
      3b7u
      3cho
      3chp
      3chq
      3chr
      3chs
      3fh5
      3fh7
      3fh8
      3fhe
      3fts
      3ftu
      3ftv
      3ftw
      3ftx
      3fty
      3ftz
      3fu0
      3fu3
      3fu5
      3fu6
      3fud
      3fue
      3fuf
      3fuh
    PDB 3fui-3fun

Ytterbium in PDB, part 1 (1-50), PDB files 1c5k - 3fuh






Experimental structures of coordination spheres of Ytterbium (Yb) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Ytterbium atoms.
PDB files 1-50 (1c5k - 3fuh):
  1. 1c5k - The Structure Of Tolb, An Essential Component Of The Tol- Dependent Translocation System and Its Interactions With the Translocation Domain of Colicin E9
  2. 1cnt - Ciliary Neurotrophic Factor
  3. 1ggy - Human Factor XIII With Ytterbium Bound in the Ion Site
  4. 1gw6 - Structure of Leukotriene A4 Hydrolase D375N Mutant
  5. 1h19 - Structure of [E271Q] Leukotriene A4 Hydrolase
  6. 1hs6 - Structure of Leukotriene A4 Hydrolase Complexed With Bestatin.
  7. 1k90 - Crystal Structure Of the Adenylyl Cyclase Domain of Anthrax Edema Factor (Ef) in Complex With Calmodulin and 3' Deoxy-Atp
  8. 1lvc - Crystal Structure Of the Adenylyl Cyclase Domain of Anthrax Edema Factor (Ef) in Complex With Calmodulin and 2' Deoxy, 3' Anthraniloyl Atp
  9. 1ncg - Structural Basis of Cell-Cell Adhesion By Cadherins
  10. 1nch - Structural Basis of Cell-Cell Adhesion By Cadherins
  11. 1pk0 - Crystal Structure of the EF3-Cam Complexed With Pmeapp
  12. 1s26 - Structure Of Anthrax Edema Factor-Calmodulin-Alpha,Beta- Methyleneadenosine 5'-Triphosphate Complex Reveals An Alternative Mode of Atp Binding to the Catalytic Site
  13. 1sk6 - Crystal Structure Of the Adenylyl Cyclase Domain of Anthrax Edema Factor (Ef) in Complex With Calmodulin, 3',5' Cyclic Amp (Camp), and Pyrophosphate
  14. 1sqm - Structure of [R563A] Leukotriene A4 Hydrolase
  15. 1ytt - Yb Substituted Subtilisin Fragment of Mannose Binding Protein-A (Sub-Mbp-A), Mad Structure At 110K
  16. 1z1y - Crystal Structure of Methylated PVS25, An Ookinete Protein From Plasmodium Vivax
  17. 2bop - Crystal Structure At 1.7 Angstroms of the Bovine Papillomavirus-1 E2 Dna-Binding Domain Bound to Its Dna Target
  18. 2j6j - Prefusion Form of the Vesicular Stomatitis Virus Glycoprotein G Ectodomain
  19. 2k62 - uc(Nmr) Solution Structure of the Supramolecular Adduct Between A Liver Cytosolic Bile Acid Binding Protein and A Bile Acid-Based Gd(III)-Chelate
  20. 2o6n - RH4B: Designed Right-Handed Coiled Coil Tetramer With All Biological Amino Acids
  21. 2r59 - Leukotriene A4 Hydrolase Complexed With Inhibitor RB3041
  22. 2vj8 - Complex of Human Leukotriene A4 Hydrolase With A Hydroxamic Acid Inhibitor
  23. 3b7r - Leukotriene A4 Hydrolase Complexed With Inhibitor RB3040
  24. 3b7s - [E296Q]LTA4H in Complex With Rsr Substrate
  25. 3b7t - [E296Q]LTA4H in Complex With Arg-Ala-Arg Substrate
  26. 3b7u - Leukotriene A4 Hydrolase Complexed With Kelatorphan
  27. 3cho - Crystal Structure of Leukotriene A4 Hydrolase in Complex With 2-Amino-N-[4-(Phenylmethoxy)Phenyl]-Acetamide
  28. 3chp - Crystal Structure of Leukotriene A4 Hydrolase in Complex With (3S)-3-Amino-4-Oxo-4-[(4-Phenylmethoxyphenyl) Amino]Butanoic Acid
  29. 3chq - Crystal Structure of Leukotriene A4 Hydrolase in Complex With N5-[4-(Phenylmethoxy)Phenyl]-L-Glutamine
  30. 3chr - Crystal Structure of Leukotriene A4 Hydrolase in Complex With 4-Amino-N-[4-(Phenylmethoxy)Phenyl]-Butanamide
  31. 3chs - Crystal Structure of Leukotriene A4 Hydrolase in Complex With (2S)-2-Amino-5-[[4-[(2S)-2-Hydroxy-2-Phenyl- Ethoxy]Phenyl]Amino]-5-Oxo-Pentanoic Acid
  32. 3fh5 - Leukotriene A4 Hydrolase Complexed With Inhibitor (2R)-2-[(4- Benzylphenoxy)Methyl]Pyrrolidine.
  33. 3fh7 - Leukotriene A4 Hydrolase Complexed With Inhibitor 4-[(2S)-2-{[4-(4- Chlorophenoxy)Phenoxy]Methyl}Pyrrolidin-1-Yl]Butanoate.
  34. 3fh8 - Leukotriene A4 Hydrolase Complexed With Inhibitor 1-[2-(4- Benzylphenoxy)Ethyl]Pyrrolidine.
  35. 3fhe - Leukotriene A4 Hydrolase Complexed With Inhibitor N-[3-(4- Benzylphenoxy)Propyl]-N-Methyl-Beta-Alanine.
  36. 3fts - Leukotriene A4 Hydrolase in Complex With Resveratrol
  37. 3ftu - Leukotriene A4 Hydrolase in Complex With Dihydroresveratrol
  38. 3ftv - Leukotriene A4 Hydrolase in Complex With Fragment N- (Pyridin-3-Ylmethyl)Aniline
  39. 3ftw - Leukotriene A4 Hydrolase in Complex With Fragments N- (Pyridin-3-Ylmethyl)Aniline and Acetate
  40. 3ftx - Leukotriene A4 Hydrolase in Complex With Dihydroresveratrol and Bestatin
  41. 3fty - Leukotriene A4 Hydrolase in Complex With Fragment 3- (Benzyloxy)Pyridin-2-Amine
  42. 3ftz - Leukotriene A4 Hydrolase in Complex With Fragment 2-(Pyridin-3- Ylmethoxy)Aniline
  43. 3fu0 - Leukotriene A4 Hydrolase in Complex With Fragment 4-(4- Fluorobenzoyl)Pyridine
  44. 3fu3 - Leukotriene A4 Hydrolase in Complex With Fragment 4-(2- Amino-1,3-Thiazol-4-Yl)Phenol
  45. 3fu5 - Leukotriene A4 Hydrolase in Complex With (5-Thiophen-2- Ylthiophen-2-Yl)Methylamine
  46. 3fu6 - Leukotriene A4 Hydrolase in Complex With Fragment (4- Thiophen-2-Ylphenyl)Methanamine
  47. 3fud - Leukotriene A4 Hydrolase in Complex With N-Methyl-1-(2- Thiophen-2-Ylphenyl)Methanamine
  48. 3fue - Leukotriene A4 Hydrolase in Complex With Fragment 5- Chloroindole and Bestatin
  49. 3fuf - Leukotriene A4 Hydrolase in Complex With Fragment 5- Fluoroindole and Bestatin
  50. 3fuh - Leukotriene A4 Hydrolase in Complex With Fragment 5- Hydroxyindole and Bestatin


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Ytterbium coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
© Copyright 2008-2012 by atomistry.com